Animal Genetics and Breeding Unit, 2351 Armidale, NSW, Australia
Home of Software from Vinzent Boerner
All executables are optimized for 64 bit Intel architecture, for Linux only, and run from the command line
A Linux kernel >= 3.10 is required
Stack size must be set to unlimited. Execute "ulimit -s unlimited" on your command line or adjust your .bashrc
Many implemented algorithms are parallelized or make use of Intel's parallelized Math Kernel library
Users may set the number of threads with the environment variables "OMP_THREAD_LIMIT", "OMP_NUM_THREADS" and "MKL_NUM_THREADS"
For software versions specifically designed for single core computers please contact the author
For question, comments and bug reports email to: Vinzent Boerner (vinzent"dot"boerner"at"gmx"dot"net)

BESSiE
A software for Best Linear Unbiased(BLUP) and Bayesian analysis of linear mixed models

Executable (sha1sum: 23f37df116530db0183b7a3d59ed8e0bc926e5ab) Manual Examples

Literature: Boerner and Tier Genet Sel Evol (2016) 48:63,DOI 10.1186/s12711-016-0241-x

ParentSearch
A software for large scale SNP marker based parentage assignment and verfication

Executable (sha1sum: 6b64b7680caeab7e382fbd1f754ba86220b96db1) Manual: --help Example:comming soon

Literature: Boerner Genet Sel Evol (2017) 49:50, DOI 10.1186/s12711-017-0324-3

BreedComp
A software for large scale SNP marker based estimation of the composition of admixed SNP genotypes

Executable (sha1sum: 2ef5920413de652dc1c583287c0de828b6415804) Manual: --help Example:comming soon

Literature: Vinzent Boerner and Doerte Wittenburg, On Estimation of Genome Composition in Genetically Admixed Individuals Using Constrained Genomic Regression, Frontiers in Genetics, 29/05/2018, doi: 10.3389/fgene.2018.00185

Disclaimer: All software comes without any warranty and guaranteed support. It can be used by the scientific community free of charge. Commercial users must contact the authors.